Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.8■□□□□ 0.92
Nphp4P59240 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nphp4P59240 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp4P59240 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Nphp4P59240 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nphp4P59240 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Nphp4P59240 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Nphp4P59240 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.79■□□□□ 0.92
Nphp4P59240 Gm18737-201ENSMUST00000173594 937 ntBASIC20.79■□□□□ 0.92
Nphp4P59240 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp4P59240 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Nphp4P59240 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.78■□□□□ 0.92
Nphp4P59240 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC20.78■□□□□ 0.92
Nphp4P59240 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nphp4P59240 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Gm27920-201ENSMUST00000183953 96 ntBASIC20.78■□□□□ 0.92
Nphp4P59240 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp4P59240 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp4P59240 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.77■□□□□ 0.91
Nphp4P59240 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.77■□□□□ 0.91
Nphp4P59240 Gm22175-201ENSMUST00000175007 78 ntBASIC20.77■□□□□ 0.91
Nphp4P59240 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Gm29541-201ENSMUST00000191351 678 ntBASIC20.77■□□□□ 0.91
Nphp4P59240 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.77■□□□□ 0.91
Nphp4P59240 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Nphp4P59240 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp4P59240 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Nphp4P59240 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.76■□□□□ 0.91
Nphp4P59240 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nphp4P59240 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.76■□□□□ 0.91
Nphp4P59240 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.76■□□□□ 0.91
Nphp4P59240 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.76■□□□□ 0.91
Nphp4P59240 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nphp4P59240 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms