Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sssca1P56873 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sssca1P56873 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sssca1P56873 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sssca1P56873 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.51□□□□□ -0.41
Sssca1P56873 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Gm22697-201ENSMUST00000175194 63 ntBASIC12.51□□□□□ -0.41
Sssca1P56873 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sssca1P56873 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Sssca1P56873 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.51□□□□□ -0.41
Sssca1P56873 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.51□□□□□ -0.41
Sssca1P56873 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.5□□□□□ -0.41
Sssca1P56873 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sssca1P56873 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.5□□□□□ -0.41
Sssca1P56873 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.5□□□□□ -0.41
Sssca1P56873 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Gm18101-201ENSMUST00000215769 548 ntBASIC12.5□□□□□ -0.41
Sssca1P56873 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.5□□□□□ -0.41
Sssca1P56873 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Sssca1P56873 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sssca1P56873 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.5□□□□□ -0.41
Sssca1P56873 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.5□□□□□ -0.41
Sssca1P56873 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sssca1P56873 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.49□□□□□ -0.41
Sssca1P56873 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.49□□□□□ -0.41
Sssca1P56873 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sssca1P56873 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sssca1P56873 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.49□□□□□ -0.41
Sssca1P56873 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms