Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.83□□□□□ -0.2
Cldn18P56857 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Gm15590-201ENSMUST00000078419 552 ntBASIC13.83□□□□□ -0.2
Cldn18P56857 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn18P56857 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldn18P56857 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.82□□□□□ -0.2
Cldn18P56857 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cldn18P56857 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldn18P56857 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.82□□□□□ -0.2
Cldn18P56857 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldn18P56857 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.82□□□□□ -0.2
Cldn18P56857 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn18P56857 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.82□□□□□ -0.2
Cldn18P56857 Gm9682-201ENSMUST00000197505 556 ntBASIC13.82□□□□□ -0.2
Cldn18P56857 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldn18P56857 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn18P56857 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn18P56857 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cldn18P56857 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.82□□□□□ -0.2
Cldn18P56857 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.81□□□□□ -0.2
Cldn18P56857 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.81□□□□□ -0.2
Cldn18P56857 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.81□□□□□ -0.2
Cldn18P56857 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.81□□□□□ -0.2
Cldn18P56857 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn18P56857 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn18P56857 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn18P56857 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn18P56857 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn18P56857 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.8□□□□□ -0.2
Cldn18P56857 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn18P56857 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.8□□□□□ -0.2
Cldn18P56857 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Gm27628-201ENSMUST00000184911 107 ntBASIC13.8□□□□□ -0.2
Cldn18P56857 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.8□□□□□ -0.2
Cldn18P56857 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.8□□□□□ -0.2
Cldn18P56857 Gm45167-201ENSMUST00000208007 322 ntBASIC13.8□□□□□ -0.2
Cldn18P56857 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn18P56857 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.8□□□□□ -0.2
Cldn18P56857 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn18P56857 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn18P56857 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn18P56857 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms