Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm8825-201ENSMUST00000182565 998 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Gm4518-201ENSMUST00000182638 718 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.29■□□□□ 0.52
Irf5P56477 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.29■□□□□ 0.52
Irf5P56477 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf5P56477 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Irf5P56477 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Irf5P56477 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.28■□□□□ 0.52
Irf5P56477 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.28■□□□□ 0.52
Irf5P56477 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.28■□□□□ 0.52
Irf5P56477 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Irf5P56477 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.28■□□□□ 0.52
Irf5P56477 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.28■□□□□ 0.52
Irf5P56477 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Irf5P56477 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Irf5P56477 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Irf5P56477 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Irf5P56477 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Irf5P56477 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Irf5P56477 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Irf5P56477 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.27■□□□□ 0.52
Irf5P56477 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Gm8344-201ENSMUST00000119813 856 ntBASIC18.27■□□□□ 0.52
Irf5P56477 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.27■□□□□ 0.52
Irf5P56477 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.27■□□□□ 0.52
Irf5P56477 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.27■□□□□ 0.52
Irf5P56477 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Irf5P56477 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.27■□□□□ 0.52
Irf5P56477 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Irf5P56477 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Irf5P56477 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Irf5P56477 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Irf5P56477 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Irf5P56477 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.26■□□□□ 0.51
Irf5P56477 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Irf5P56477 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.26■□□□□ 0.51
Irf5P56477 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.26■□□□□ 0.51
Irf5P56477 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Irf5P56477 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Irf5P56477 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
Irf5P56477 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms