Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.45■□□□□ 0.38
Rrp1P56183 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rrp1P56183 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rrp1P56183 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Gm15794-201ENSMUST00000120182 631 ntBASIC17.44■□□□□ 0.38
Rrp1P56183 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.44■□□□□ 0.38
Rrp1P56183 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.44■□□□□ 0.38
Rrp1P56183 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rrp1P56183 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rrp1P56183 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rrp1P56183 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rrp1P56183 Efs-202ENSMUST00000227037 2540 ntBASIC17.43■□□□□ 0.38
Rrp1P56183 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Gm45328-201ENSMUST00000210942 917 ntBASIC17.43■□□□□ 0.38
Rrp1P56183 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rrp1P56183 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.43■□□□□ 0.38
Rrp1P56183 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rrp1P56183 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm14722-201ENSMUST00000118943 689 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm8825-201ENSMUST00000182565 998 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm4518-201ENSMUST00000182638 718 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.42■□□□□ 0.38
Rrp1P56183 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rrp1P56183 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Rrp1P56183 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rrp1P56183 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.41■□□□□ 0.38
Rrp1P56183 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rrp1P56183 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Rrp1P56183 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp1P56183 Gm25016-201ENSMUST00000158399 131 ntBASIC17.41■□□□□ 0.38
Rrp1P56183 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.41■□□□□ 0.38
Rrp1P56183 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.41■□□□□ 0.38
Rrp1P56183 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.41■□□□□ 0.38
Rrp1P56183 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms