Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
NcanP55066 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NcanP55066 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.18■□□□□ 0.18
NcanP55066 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.18■□□□□ 0.18
NcanP55066 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
NcanP55066 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NcanP55066 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NcanP55066 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.18■□□□□ 0.18
NcanP55066 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NcanP55066 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NcanP55066 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NcanP55066 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NcanP55066 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.17■□□□□ 0.18
NcanP55066 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.17■□□□□ 0.18
NcanP55066 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NcanP55066 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.17■□□□□ 0.18
NcanP55066 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.17■□□□□ 0.18
NcanP55066 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 Gm42612-201ENSMUST00000197986 623 ntBASIC16.17■□□□□ 0.18
NcanP55066 Gm43170-201ENSMUST00000199827 612 ntBASIC16.17■□□□□ 0.18
NcanP55066 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.17■□□□□ 0.18
NcanP55066 Shd-206ENSMUST00000225145 998 ntBASIC16.17■□□□□ 0.18
NcanP55066 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.17■□□□□ 0.18
NcanP55066 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.17■□□□□ 0.18
NcanP55066 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NcanP55066 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.17■□□□□ 0.18
NcanP55066 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NcanP55066 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.17■□□□□ 0.18
NcanP55066 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NcanP55066 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NcanP55066 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
NcanP55066 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.16■□□□□ 0.18
NcanP55066 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Gm11425-201ENSMUST00000119608 498 ntBASIC16.16■□□□□ 0.18
NcanP55066 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.16■□□□□ 0.18
NcanP55066 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.16■□□□□ 0.18
NcanP55066 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NcanP55066 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.16■□□□□ 0.18
NcanP55066 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.16■□□□□ 0.18
NcanP55066 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Gm9396-201ENSMUST00000076703 567 ntBASIC16.16■□□□□ 0.18
NcanP55066 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NcanP55066 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NcanP55066 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.15■□□□□ 0.18
NcanP55066 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.15■□□□□ 0.18
NcanP55066 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Gm18018-201ENSMUST00000198273 408 ntBASIC16.15■□□□□ 0.18
NcanP55066 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.15■□□□□ 0.18
NcanP55066 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.15■□□□□ 0.18
NcanP55066 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.15■□□□□ 0.18
NcanP55066 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.15■□□□□ 0.18
NcanP55066 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.15■□□□□ 0.18
NcanP55066 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NcanP55066 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms