Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox1P53783 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sox1P53783 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
Sox1P53783 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Sox1P53783 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox1P53783 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Sox1P53783 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sox1P53783 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox1P53783 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.73■□□□□ 0.11
Sox1P53783 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sox1P53783 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.73■□□□□ 0.11
Sox1P53783 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sox1P53783 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox1P53783 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
Sox1P53783 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Gm12742-201ENSMUST00000117326 410 ntBASIC15.72■□□□□ 0.11
Sox1P53783 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sox1P53783 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Sox1P53783 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sox1P53783 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.72■□□□□ 0.11
Sox1P53783 Gm18049-201ENSMUST00000208909 581 ntBASIC15.72■□□□□ 0.11
Sox1P53783 Gm9257-201ENSMUST00000221254 232 ntBASIC15.72■□□□□ 0.11
Sox1P53783 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sox1P53783 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox1P53783 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox1P53783 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox1P53783 Mir1247-201ENSMUST00000116706 82 ntBASIC15.71■□□□□ 0.11
Sox1P53783 Gm12957-201ENSMUST00000117835 377 ntBASIC15.71■□□□□ 0.11
Sox1P53783 Gm11543-201ENSMUST00000120758 370 ntBASIC15.71■□□□□ 0.11
Sox1P53783 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox1P53783 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 Gm18737-201ENSMUST00000173594 937 ntBASIC15.71■□□□□ 0.11
Sox1P53783 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox1P53783 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.71■□□□□ 0.11
Sox1P53783 Gm42612-201ENSMUST00000197986 623 ntBASIC15.71■□□□□ 0.11
Sox1P53783 Gm43170-201ENSMUST00000199827 612 ntBASIC15.71■□□□□ 0.11
Sox1P53783 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox1P53783 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.71■□□□□ 0.1
Sox1P53783 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.71■□□□□ 0.1
Sox1P53783 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Sox1P53783 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.7■□□□□ 0.1
Sox1P53783 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Gm27892-201ENSMUST00000185017 106 ntBASIC15.7■□□□□ 0.1
Sox1P53783 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.7■□□□□ 0.1
Sox1P53783 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox1P53783 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox1P53783 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms