Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.85□□□□□ -0.35
Nkx2-1P50220 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.85□□□□□ -0.35
Nkx2-1P50220 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.84□□□□□ -0.35
Nkx2-1P50220 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-1P50220 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-1P50220 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-1P50220 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-1P50220 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-1P50220 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-1P50220 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms