Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc3P49135 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.33■□□□□ 0.52
Ercc3P49135 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ercc3P49135 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc3P49135 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ercc3P49135 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.33■□□□□ 0.52
Ercc3P49135 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.33■□□□□ 0.52
Ercc3P49135 Gm18195-201ENSMUST00000207604 706 ntBASIC18.33■□□□□ 0.52
Ercc3P49135 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc3P49135 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.33■□□□□ 0.52
Ercc3P49135 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc3P49135 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc3P49135 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
Ercc3P49135 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ercc3P49135 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.32■□□□□ 0.52
Ercc3P49135 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.32■□□□□ 0.52
Ercc3P49135 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ercc3P49135 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc3P49135 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
Ercc3P49135 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ercc3P49135 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Gm15358-201ENSMUST00000119249 520 ntBASIC18.31■□□□□ 0.52
Ercc3P49135 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.31■□□□□ 0.52
Ercc3P49135 Gm18733-201ENSMUST00000173950 856 ntBASIC18.31■□□□□ 0.52
Ercc3P49135 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Mir5126-201ENSMUST00000175513 77 ntBASIC18.31■□□□□ 0.52
Ercc3P49135 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.31■□□□□ 0.52
Ercc3P49135 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.31■□□□□ 0.52
Ercc3P49135 AW822252-206ENSMUST00000208904 237 ntBASIC18.31■□□□□ 0.52
Ercc3P49135 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc3P49135 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.3■□□□□ 0.52
Ercc3P49135 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.3■□□□□ 0.52
Ercc3P49135 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.3■□□□□ 0.52
Ercc3P49135 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.3■□□□□ 0.52
Ercc3P49135 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.3■□□□□ 0.52
Ercc3P49135 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc3P49135 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
Ercc3P49135 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.29■□□□□ 0.52
Ercc3P49135 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.29■□□□□ 0.52
Ercc3P49135 Gm27628-201ENSMUST00000184911 107 ntBASIC18.29■□□□□ 0.52
Ercc3P49135 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Ercc3P49135 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Ercc3P49135 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc3P49135 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ercc3P49135 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.29■□□□□ 0.52
Ercc3P49135 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.29■□□□□ 0.52
Ercc3P49135 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms