Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.88□□□□□ -0.03
Prox1P48437 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prox1P48437 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Prox1P48437 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prox1P48437 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.88□□□□□ -0.03
Prox1P48437 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.88□□□□□ -0.03
Prox1P48437 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.88□□□□□ -0.03
Prox1P48437 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prox1P48437 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.87□□□□□ -0.03
Prox1P48437 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prox1P48437 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Prox1P48437 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Prox1P48437 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.87□□□□□ -0.03
Prox1P48437 Gm13559-201ENSMUST00000120476 863 ntBASIC14.87□□□□□ -0.03
Prox1P48437 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Prox1P48437 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.87□□□□□ -0.03
Prox1P48437 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Prox1P48437 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prox1P48437 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prox1P48437 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.86□□□□□ -0.03
Prox1P48437 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.86□□□□□ -0.03
Prox1P48437 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.86□□□□□ -0.03
Prox1P48437 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.86□□□□□ -0.03
Prox1P48437 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.86□□□□□ -0.03
Prox1P48437 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Prox1P48437 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.86□□□□□ -0.03
Prox1P48437 Gm18959-201ENSMUST00000208954 655 ntBASIC14.86□□□□□ -0.03
Prox1P48437 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prox1P48437 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prox1P48437 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Prox1P48437 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Prox1P48437 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Prox1P48437 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prox1P48437 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms