Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Xcl1P47993 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Xcl1P47993 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Xcl1P47993 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.08□□□□□ -0.8
Xcl1P47993 Efs-202ENSMUST00000227037 2540 ntBASIC10.08□□□□□ -0.8
Xcl1P47993 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.08□□□□□ -0.8
Xcl1P47993 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC10.08□□□□□ -0.8
Xcl1P47993 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Xcl1P47993 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Xcl1P47993 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC10.08□□□□□ -0.8
Xcl1P47993 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.08□□□□□ -0.8
Xcl1P47993 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Xcl1P47993 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC10.08□□□□□ -0.8
Xcl1P47993 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Xcl1P47993 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Xcl1P47993 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Xcl1P47993 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.07□□□□□ -0.8
Xcl1P47993 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Xcl1P47993 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.07□□□□□ -0.8
Xcl1P47993 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Xcl1P47993 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Xcl1P47993 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.07□□□□□ -0.8
Xcl1P47993 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Xcl1P47993 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.07□□□□□ -0.8
Xcl1P47993 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.07□□□□□ -0.8
Xcl1P47993 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC10.07□□□□□ -0.8
Xcl1P47993 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Xcl1P47993 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms