Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.03■□□□□ 0.64
Nkx1-2P42580 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-2P42580 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 AC167013.2-201ENSMUST00000228520 2684 ntBASIC19.02■□□□□ 0.64
Nkx1-2P42580 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.02■□□□□ 0.64
Nkx1-2P42580 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-2P42580 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-2P42580 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-2P42580 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-2P42580 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-2P42580 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Rprl3-201ENSMUST00000157400 290 ntBASIC19.01■□□□□ 0.63
Nkx1-2P42580 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Gm27704-201ENSMUST00000185094 107 ntBASIC19.01■□□□□ 0.63
Nkx1-2P42580 Gm44454-201ENSMUST00000198541 138 ntBASIC19.01■□□□□ 0.63
Nkx1-2P42580 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.01■□□□□ 0.63
Nkx1-2P42580 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.01■□□□□ 0.63
Nkx1-2P42580 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-2P42580 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Gm8784-201ENSMUST00000222096 1435 ntBASIC19■□□□□ 0.63
Nkx1-2P42580 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nkx1-2P42580 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Gm12134-201ENSMUST00000122109 520 ntBASIC19■□□□□ 0.63
Nkx1-2P42580 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nkx1-2P42580 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19■□□□□ 0.63
Nkx1-2P42580 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19■□□□□ 0.63
Nkx1-2P42580 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19■□□□□ 0.63
Nkx1-2P42580 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Gm12620-201ENSMUST00000119791 1986 ntBASIC19■□□□□ 0.63
Nkx1-2P42580 Gm12612-201ENSMUST00000140182 1986 ntBASIC19■□□□□ 0.63
Nkx1-2P42580 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19■□□□□ 0.63
Nkx1-2P42580 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nkx1-2P42580 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-2P42580 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Nkx1-2P42580 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Gm7367-201ENSMUST00000057611 492 ntBASIC18.99■□□□□ 0.63
Nkx1-2P42580 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms