Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Abca1P41233 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Abca1P41233 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Abca1P41233 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Abca1P41233 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Abca1P41233 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.85□□□□□ -0.35
Abca1P41233 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.85□□□□□ -0.35
Abca1P41233 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.85□□□□□ -0.35
Abca1P41233 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Gm8396-201ENSMUST00000057361 823 ntBASIC12.85□□□□□ -0.35
Abca1P41233 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Abca1P41233 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Gm44335-201ENSMUST00000196879 141 ntBASIC12.84□□□□□ -0.35
Abca1P41233 Gm44297-201ENSMUST00000198304 141 ntBASIC12.84□□□□□ -0.35
Abca1P41233 Gm44346-201ENSMUST00000198851 141 ntBASIC12.84□□□□□ -0.35
Abca1P41233 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.84□□□□□ -0.35
Abca1P41233 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Abca1P41233 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Abca1P41233 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Abca1P41233 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.83□□□□□ -0.35
Abca1P41233 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Abca1P41233 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.83□□□□□ -0.35
Abca1P41233 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Abca1P41233 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Abca1P41233 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.83□□□□□ -0.35
Abca1P41233 Gm5186-201ENSMUST00000218781 920 ntBASIC12.83□□□□□ -0.35
Abca1P41233 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.83□□□□□ -0.35
Abca1P41233 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Abca1P41233 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.83□□□□□ -0.35
Abca1P41233 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.83□□□□□ -0.36
Abca1P41233 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.83□□□□□ -0.36
Abca1P41233 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Abca1P41233 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Haglr-201ENSMUST00000100000 2085 ntBASIC12.83□□□□□ -0.36
Abca1P41233 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Abca1P41233 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Abca1P41233 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Abca1P41233 Gm8344-201ENSMUST00000119813 856 ntBASIC12.83□□□□□ -0.36
Abca1P41233 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Abca1P41233 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.83□□□□□ -0.36
Abca1P41233 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.83□□□□□ -0.36
Abca1P41233 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.83□□□□□ -0.36
Abca1P41233 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abca1P41233 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Abca1P41233 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Abca1P41233 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.82□□□□□ -0.36
Abca1P41233 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Abca1P41233 Gm20949-201ENSMUST00000206478 952 ntBASIC12.82□□□□□ -0.36
Abca1P41233 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms