Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Cxcl12P40224 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Cxcl12P40224 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cxcl12P40224 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cxcl12P40224 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cxcl12P40224 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm14722-201ENSMUST00000118943 689 ntBASIC15.86■□□□□ 0.13
Cxcl12P40224 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Cxcl12P40224 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm29541-201ENSMUST00000191351 678 ntBASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.86■□□□□ 0.13
Cxcl12P40224 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cxcl12P40224 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.86■□□□□ 0.13
Cxcl12P40224 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.86■□□□□ 0.13
Cxcl12P40224 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcl12P40224 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.85■□□□□ 0.13
Cxcl12P40224 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Cxcl12P40224 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcl12P40224 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Gm6912-201ENSMUST00000117218 544 ntBASIC15.84■□□□□ 0.13
Cxcl12P40224 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cxcl12P40224 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcl12P40224 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cxcl12P40224 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.83■□□□□ 0.13
Cxcl12P40224 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cxcl12P40224 Gm12859-201ENSMUST00000117834 427 ntBASIC15.83■□□□□ 0.12
Cxcl12P40224 Gm13015-201ENSMUST00000118674 204 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms