Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm6550-201ENSMUST00000187574 993 ntBASIC12.67□□□□□ -0.38
Timp3P39876 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.67□□□□□ -0.38
Timp3P39876 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.67□□□□□ -0.38
Timp3P39876 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Timp3P39876 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.67□□□□□ -0.38
Timp3P39876 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Timp3P39876 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Timp3P39876 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Timp3P39876 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.66□□□□□ -0.38
Timp3P39876 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Gm15173-201ENSMUST00000122049 433 ntBASIC12.66□□□□□ -0.38
Timp3P39876 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.66□□□□□ -0.38
Timp3P39876 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.66□□□□□ -0.38
Timp3P39876 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.66□□□□□ -0.38
Timp3P39876 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.66□□□□□ -0.38
Timp3P39876 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.66□□□□□ -0.38
Timp3P39876 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Timp3P39876 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.66□□□□□ -0.38
Timp3P39876 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timp3P39876 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Timp3P39876 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.65□□□□□ -0.38
Timp3P39876 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Timp3P39876 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Timp3P39876 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Timp3P39876 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm27525-201ENSMUST00000184465 107 ntBASIC12.65□□□□□ -0.38
Timp3P39876 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.65□□□□□ -0.38
Timp3P39876 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.65□□□□□ -0.38
Timp3P39876 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Timp3P39876 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.65□□□□□ -0.38
Timp3P39876 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Timp3P39876 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Timp3P39876 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timp3P39876 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
Timp3P39876 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Timp3P39876 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Timp3P39876 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Timp3P39876 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms