Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Foxa2P35583 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Gm27357-201ENSMUST00000183754 135 ntBASIC13.01□□□□□ -0.33
Foxa2P35583 Gm7506-201ENSMUST00000207758 815 ntBASIC13.01□□□□□ -0.33
Foxa2P35583 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.01□□□□□ -0.33
Foxa2P35583 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.01□□□□□ -0.33
Foxa2P35583 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Foxa2P35583 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.01□□□□□ -0.33
Foxa2P35583 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxa2P35583 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.01□□□□□ -0.33
Foxa2P35583 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa2P35583 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13□□□□□ -0.33
Foxa2P35583 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13□□□□□ -0.33
Foxa2P35583 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13□□□□□ -0.33
Foxa2P35583 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Foxa2P35583 AC108846.1-201ENSMUST00000214531 513 ntBASIC13□□□□□ -0.33
Foxa2P35583 AC153889.1-201ENSMUST00000219257 330 ntBASIC13□□□□□ -0.33
Foxa2P35583 Gm18622-201ENSMUST00000219361 595 ntBASIC13□□□□□ -0.33
Foxa2P35583 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Foxa2P35583 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Foxa2P35583 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa2P35583 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Grk6-207ENSMUST00000225925 2769 ntBASIC12.99□□□□□ -0.33
Foxa2P35583 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxa2P35583 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Foxa2P35583 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Foxa2P35583 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Foxa2P35583 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxa2P35583 Gm4459-201ENSMUST00000118750 468 ntBASIC12.99□□□□□ -0.33
Foxa2P35583 Gm15372-201ENSMUST00000120729 834 ntBASIC12.99□□□□□ -0.33
Foxa2P35583 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.99□□□□□ -0.33
Foxa2P35583 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Gm19164-201ENSMUST00000210667 640 ntBASIC12.99□□□□□ -0.33
Foxa2P35583 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.99□□□□□ -0.33
Foxa2P35583 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Foxa2P35583 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa2P35583 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa2P35583 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa2P35583 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa2P35583 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms