Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccl6P27784 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ccl6P27784 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccl6P27784 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccl6P27784 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccl6P27784 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ccl6P27784 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccl6P27784 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl6P27784 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccl6P27784 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Gm12895-201ENSMUST00000122214 226 ntBASIC12.07□□□□□ -0.48
Ccl6P27784 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Gm27357-201ENSMUST00000183754 135 ntBASIC12.07□□□□□ -0.48
Ccl6P27784 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccl6P27784 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl6P27784 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl6P27784 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl6P27784 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm8825-201ENSMUST00000182565 998 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm4518-201ENSMUST00000182638 718 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl6P27784 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.06□□□□□ -0.48
Ccl6P27784 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccl6P27784 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl6P27784 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccl6P27784 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms