Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm3P21107 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpm3P21107 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm3P21107 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tpm3P21107 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm3P21107 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.34■□□□□ 0.37
Tpm3P21107 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm3P21107 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm3P21107 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tpm3P21107 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Tpm3P21107 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm3P21107 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm3P21107 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.34■□□□□ 0.37
Tpm3P21107 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tpm3P21107 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.33■□□□□ 0.37
Tpm3P21107 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Tpm3P21107 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm3P21107 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm3P21107 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Gm11539-201ENSMUST00000119837 557 ntBASIC17.33■□□□□ 0.36
Tpm3P21107 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.33■□□□□ 0.36
Tpm3P21107 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.33■□□□□ 0.36
Tpm3P21107 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm3P21107 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm3P21107 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.33■□□□□ 0.36
Tpm3P21107 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm3P21107 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm3P21107 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.32■□□□□ 0.36
Tpm3P21107 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.32■□□□□ 0.36
Tpm3P21107 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Tpm3P21107 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tpm3P21107 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm3P21107 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm3P21107 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tpm3P21107 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Tpm3P21107 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms