Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.24■□□□□ 0.19
Cd44P15379 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Mir3081-201ENSMUST00000175305 84 ntBASIC16.24■□□□□ 0.19
Cd44P15379 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd44P15379 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.24■□□□□ 0.19
Cd44P15379 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.24■□□□□ 0.19
Cd44P15379 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Cd44P15379 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd44P15379 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd44P15379 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cd44P15379 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd44P15379 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd44P15379 Gm23634-201ENSMUST00000175071 91 ntBASIC16.23■□□□□ 0.19
Cd44P15379 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.23■□□□□ 0.19
Cd44P15379 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd44P15379 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.23■□□□□ 0.19
Cd44P15379 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.23■□□□□ 0.19
Cd44P15379 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.23■□□□□ 0.19
Cd44P15379 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cd44P15379 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd44P15379 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cd44P15379 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cd44P15379 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Cd44P15379 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.22■□□□□ 0.19
Cd44P15379 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cd44P15379 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cd44P15379 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.22■□□□□ 0.19
Cd44P15379 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cd44P15379 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cd44P15379 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.22■□□□□ 0.19
Cd44P15379 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cd44P15379 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Cd44P15379 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cd44P15379 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd44P15379 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd44P15379 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd44P15379 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd44P15379 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.21■□□□□ 0.19
Cd44P15379 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cd44P15379 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cd44P15379 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cd44P15379 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.21■□□□□ 0.19
Cd44P15379 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cd44P15379 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.21■□□□□ 0.19
Cd44P15379 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.21■□□□□ 0.19
Cd44P15379 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cd44P15379 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd44P15379 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd44P15379 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cd44P15379 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd44P15379 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd44P15379 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd44P15379 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms