Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr2aP08775 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.43■□□□□ 0.38
Polr2aP08775 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Gm18018-201ENSMUST00000198273 408 ntBASIC17.42■□□□□ 0.38
Polr2aP08775 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Polr2aP08775 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.42■□□□□ 0.38
Polr2aP08775 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.42■□□□□ 0.38
Polr2aP08775 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.42■□□□□ 0.38
Polr2aP08775 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.42■□□□□ 0.38
Polr2aP08775 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr2aP08775 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Polr2aP08775 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Polr2aP08775 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.42■□□□□ 0.38
Polr2aP08775 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.41■□□□□ 0.38
Polr2aP08775 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Polr2aP08775 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.41■□□□□ 0.38
Polr2aP08775 Gm28631-201ENSMUST00000190740 334 ntBASIC17.41■□□□□ 0.38
Polr2aP08775 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.41■□□□□ 0.38
Polr2aP08775 Gm8515-201ENSMUST00000194852 576 ntBASIC17.41■□□□□ 0.38
Polr2aP08775 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.41■□□□□ 0.38
Polr2aP08775 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Polr2aP08775 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr2aP08775 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Polr2aP08775 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Polr2aP08775 AY702102-202ENSMUST00000194651 1173 ntBASIC17.4■□□□□ 0.38
Polr2aP08775 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Polr2aP08775 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Polr2aP08775 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.4■□□□□ 0.38
Polr2aP08775 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Gm44719-201ENSMUST00000206404 149 ntBASIC17.4■□□□□ 0.38
Polr2aP08775 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr2aP08775 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Polr2aP08775 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Gm45668-201ENSMUST00000211271 493 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Polr2aP08775 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Polr2aP08775 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Polr2aP08775 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Polr2aP08775 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Polr2aP08775 Gm9908-201ENSMUST00000211534 448 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.39■□□□□ 0.37
Polr2aP08775 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Gm11478-201ENSMUST00000117851 599 ntBASIC17.38■□□□□ 0.37
Polr2aP08775 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Polr2aP08775 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Polr2aP08775 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.38■□□□□ 0.37
Polr2aP08775 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr2aP08775 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms