Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Col4a2P08122 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col4a2P08122 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col4a2P08122 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Col4a2P08122 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.24□□□□□ -0.13
Col4a2P08122 Gm6415-201ENSMUST00000118488 348 ntBASIC14.24□□□□□ -0.13
Col4a2P08122 Gm27680-201ENSMUST00000184192 160 ntBASIC14.24□□□□□ -0.13
Col4a2P08122 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.23□□□□□ -0.13
Col4a2P08122 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.23□□□□□ -0.13
Col4a2P08122 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Gm2423-201ENSMUST00000074863 733 ntBASIC14.23□□□□□ -0.13
Col4a2P08122 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.23□□□□□ -0.13
Col4a2P08122 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col4a2P08122 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a2P08122 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col4a2P08122 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col4a2P08122 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col4a2P08122 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.22□□□□□ -0.13
Col4a2P08122 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col4a2P08122 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.22□□□□□ -0.13
Col4a2P08122 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Col4a2P08122 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a2P08122 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col4a2P08122 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col4a2P08122 Gm13015-201ENSMUST00000118674 204 ntBASIC14.21□□□□□ -0.13
Col4a2P08122 Gm13823-201ENSMUST00000119930 345 ntBASIC14.21□□□□□ -0.13
Col4a2P08122 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.21□□□□□ -0.13
Col4a2P08122 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.21□□□□□ -0.13
Col4a2P08122 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.21□□□□□ -0.13
Col4a2P08122 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.21□□□□□ -0.13
Col4a2P08122 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.21□□□□□ -0.13
Col4a2P08122 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col4a2P08122 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a2P08122 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a2P08122 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.21□□□□□ -0.14
Col4a2P08122 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.21□□□□□ -0.14
Col4a2P08122 Gm27306-201ENSMUST00000183970 107 ntBASIC14.21□□□□□ -0.14
Col4a2P08122 Gm28630-201ENSMUST00000187806 498 ntBASIC14.21□□□□□ -0.14
Col4a2P08122 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a2P08122 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a2P08122 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a2P08122 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.21□□□□□ -0.14
Col4a2P08122 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.21□□□□□ -0.14
Col4a2P08122 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a2P08122 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.21□□□□□ -0.14
Col4a2P08122 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.21□□□□□ -0.14
Col4a2P08122 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.2□□□□□ -0.14
Col4a2P08122 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
Col4a2P08122 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms