Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.76□□□□□ -0.21
P06344 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
P06344 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Gm27525-201ENSMUST00000184465 107 ntBASIC13.76□□□□□ -0.21
P06344 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.76□□□□□ -0.21
P06344 Psmb5-202ENSMUST00000227257 622 ntBASIC13.76□□□□□ -0.21
P06344 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
P06344 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
P06344 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06344 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.76□□□□□ -0.21
P06344 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
P06344 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.75□□□□□ -0.21
P06344 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.75□□□□□ -0.21
P06344 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.75□□□□□ -0.21
P06344 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.75□□□□□ -0.21
P06344 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.75□□□□□ -0.21
P06344 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.75□□□□□ -0.21
P06344 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.75□□□□□ -0.21
P06344 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
P06344 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 App-207ENSMUST00000227737 2827 ntBASIC13.75□□□□□ -0.21
P06344 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
P06344 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06344 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Grk6-207ENSMUST00000225925 2769 ntBASIC13.74□□□□□ -0.21
P06344 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.74□□□□□ -0.21
P06344 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.74□□□□□ -0.21
P06344 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.74□□□□□ -0.21
P06344 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.74□□□□□ -0.21
P06344 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.74□□□□□ -0.21
P06344 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.74□□□□□ -0.21
P06344 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
P06344 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
P06344 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
P06344 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.74□□□□□ -0.21
P06344 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06344 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.73□□□□□ -0.21
P06344 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
P06344 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
P06344 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
P06344 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms