Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.55■□□□□ 0.24
Chrna1P04756 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Gm45612-201ENSMUST00000211320 160 ntBASIC16.55■□□□□ 0.24
Chrna1P04756 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna1P04756 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chrna1P04756 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Chrna1P04756 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chrna1P04756 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Chrna1P04756 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Gm27494-201ENSMUST00000184735 189 ntBASIC16.54■□□□□ 0.24
Chrna1P04756 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.54■□□□□ 0.24
Chrna1P04756 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chrna1P04756 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna1P04756 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Chrna1P04756 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Rpph1-201ENSMUST00000175096 319 ntBASIC16.53■□□□□ 0.24
Chrna1P04756 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.53■□□□□ 0.24
Chrna1P04756 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chrna1P04756 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.53■□□□□ 0.24
Chrna1P04756 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna1P04756 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chrna1P04756 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.52■□□□□ 0.24
Chrna1P04756 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.52■□□□□ 0.24
Chrna1P04756 Gm13365-201ENSMUST00000121188 973 ntBASIC16.52■□□□□ 0.24
Chrna1P04756 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chrna1P04756 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.52■□□□□ 0.24
Chrna1P04756 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.52■□□□□ 0.24
Chrna1P04756 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna1P04756 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.52■□□□□ 0.23
Chrna1P04756 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Chrna1P04756 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna1P04756 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.51■□□□□ 0.23
Chrna1P04756 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chrna1P04756 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.51■□□□□ 0.23
Chrna1P04756 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Chrna1P04756 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.51■□□□□ 0.23
Chrna1P04756 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chrna1P04756 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.51■□□□□ 0.23
Chrna1P04756 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna1P04756 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna1P04756 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Chrna1P04756 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna1P04756 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna1P04756 Dancr-204ENSMUST00000132389 2347 ntBASIC16.5■□□□□ 0.23
Chrna1P04756 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna1P04756 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna1P04756 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Chrna1P04756 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chrna1P04756 Mir1895-201ENSMUST00000122615 79 ntBASIC16.5■□□□□ 0.23
Chrna1P04756 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms