Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.59□□□□□ -0.23
P04224 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
P04224 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Gm8520-201ENSMUST00000186517 868 ntBASIC13.59□□□□□ -0.23
P04224 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.59□□□□□ -0.23
P04224 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
P04224 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
P04224 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.59□□□□□ -0.23
P04224 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.59□□□□□ -0.23
P04224 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.59□□□□□ -0.23
P04224 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.58□□□□□ -0.23
P04224 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
P04224 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
P04224 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
P04224 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.58□□□□□ -0.23
P04224 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
P04224 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.58□□□□□ -0.24
P04224 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.58□□□□□ -0.24
P04224 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.58□□□□□ -0.24
P04224 Gm18115-201ENSMUST00000221209 621 ntBASIC13.58□□□□□ -0.24
P04224 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
P04224 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
P04224 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
P04224 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
P04224 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.58□□□□□ -0.24
P04224 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.58□□□□□ -0.24
P04224 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P04224 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.57□□□□□ -0.24
P04224 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.57□□□□□ -0.24
P04224 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
P04224 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms