Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.93□□□□□ -0.34
CfdP03953 Gm13474-201ENSMUST00000122466 815 ntBASIC12.93□□□□□ -0.34
CfdP03953 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CfdP03953 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
CfdP03953 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CfdP03953 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CfdP03953 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CfdP03953 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CfdP03953 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Gm16061-201ENSMUST00000122167 857 ntBASIC12.92□□□□□ -0.34
CfdP03953 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CfdP03953 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.92□□□□□ -0.34
CfdP03953 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CfdP03953 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CfdP03953 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.91□□□□□ -0.34
CfdP03953 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CfdP03953 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.91□□□□□ -0.34
CfdP03953 Gm26039-201ENSMUST00000158152 144 ntBASIC12.91□□□□□ -0.34
CfdP03953 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
CfdP03953 Gm44430-201ENSMUST00000203376 995 ntBASIC12.91□□□□□ -0.34
CfdP03953 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.91□□□□□ -0.34
CfdP03953 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.91□□□□□ -0.34
CfdP03953 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.91□□□□□ -0.34
CfdP03953 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CfdP03953 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CfdP03953 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms