Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxa3P02831 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Hoxa3P02831 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Gm7222-201ENSMUST00000117512 906 ntBASIC12.96□□□□□ -0.33
Hoxa3P02831 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxa3P02831 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Hoxa3P02831 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hoxa3P02831 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.96□□□□□ -0.34
Hoxa3P02831 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxa3P02831 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxa3P02831 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm5682-201ENSMUST00000173402 505 ntBASIC12.95□□□□□ -0.34
Hoxa3P02831 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.95□□□□□ -0.34
Hoxa3P02831 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.95□□□□□ -0.34
Hoxa3P02831 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.95□□□□□ -0.34
Hoxa3P02831 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hoxa3P02831 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxa3P02831 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms