Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.31□□□□□ -0.6
TcraP01849 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.31□□□□□ -0.6
TcraP01849 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.31□□□□□ -0.6
TcraP01849 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TcraP01849 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TcraP01849 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.3□□□□□ -0.6
TcraP01849 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.3□□□□□ -0.6
TcraP01849 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TcraP01849 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
TcraP01849 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TcraP01849 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.3□□□□□ -0.6
TcraP01849 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TcraP01849 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.29□□□□□ -0.6
TcraP01849 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.29□□□□□ -0.6
TcraP01849 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.29□□□□□ -0.6
TcraP01849 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Gm38027-201ENSMUST00000192315 235 ntBASIC11.29□□□□□ -0.6
TcraP01849 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.29□□□□□ -0.6
TcraP01849 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.29□□□□□ -0.6
TcraP01849 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TcraP01849 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TcraP01849 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TcraP01849 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms