Protein–RNA interactions for Protein: P01680

Ig kappa chain V-IV region S107B, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01680 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.72□□□□□ -0.21
P01680 Prob1-201ENSMUST00000097619 3021 ntBASIC13.72□□□□□ -0.21
P01680 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01680 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.72□□□□□ -0.21
P01680 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01680 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P01680 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01680 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01680 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P01680 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
P01680 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.71□□□□□ -0.21
P01680 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.71□□□□□ -0.21
P01680 Gm23935-201ENSMUST00000102303 57 ntBASIC13.71□□□□□ -0.21
P01680 Gm24270-201ENSMUST00000102326 57 ntBASIC13.71□□□□□ -0.21
P01680 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Gm16198-201ENSMUST00000118766 670 ntBASIC13.71□□□□□ -0.21
P01680 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.71□□□□□ -0.21
P01680 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.71□□□□□ -0.21
P01680 Gm24245-201ENSMUST00000157318 57 ntBASIC13.71□□□□□ -0.21
P01680 Gm6736-201ENSMUST00000166583 948 ntBASIC13.71□□□□□ -0.21
P01680 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P01680 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P01680 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P01680 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.71□□□□□ -0.22
P01680 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P01680 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P01680 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
P01680 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
P01680 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
P01680 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
P01680 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Gm43575-201ENSMUST00000196420 516 ntBASIC13.7□□□□□ -0.22
P01680 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.7□□□□□ -0.22
P01680 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.7□□□□□ -0.22
P01680 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.7□□□□□ -0.22
P01680 Gm45612-201ENSMUST00000211320 160 ntBASIC13.7□□□□□ -0.22
P01680 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
P01680 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P01680 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P01680 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.69□□□□□ -0.22
P01680 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.69□□□□□ -0.22
P01680 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
P01680 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
P01680 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
P01680 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.69□□□□□ -0.22
P01680 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P01680 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P01680 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
P01680 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
P01680 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms