Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DhfrP00375 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DhfrP00375 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DhfrP00375 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DhfrP00375 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DhfrP00375 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Gm13034-201ENSMUST00000121342 3177 ntBASIC14□□□□□ -0.17
DhfrP00375 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Gm37722-201ENSMUST00000193757 208 ntBASIC14□□□□□ -0.17
DhfrP00375 Gm29707-201ENSMUST00000196325 491 ntBASIC14□□□□□ -0.17
DhfrP00375 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14□□□□□ -0.17
DhfrP00375 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14□□□□□ -0.17
DhfrP00375 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14□□□□□ -0.17
DhfrP00375 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
DhfrP00375 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DhfrP00375 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
DhfrP00375 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.99□□□□□ -0.17
DhfrP00375 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.99□□□□□ -0.17
DhfrP00375 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.99□□□□□ -0.17
DhfrP00375 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.99□□□□□ -0.17
DhfrP00375 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
DhfrP00375 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DhfrP00375 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DhfrP00375 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.98□□□□□ -0.17
DhfrP00375 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DhfrP00375 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DhfrP00375 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DhfrP00375 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DhfrP00375 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DhfrP00375 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
DhfrP00375 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.98□□□□□ -0.17
DhfrP00375 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DhfrP00375 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms