Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.65■□□□□ 0.26
Vti1aO89116 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Vti1aO89116 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vti1aO89116 Gm5682-201ENSMUST00000173402 505 ntBASIC16.65■□□□□ 0.26
Vti1aO89116 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.65■□□□□ 0.26
Vti1aO89116 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.65■□□□□ 0.26
Vti1aO89116 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1aO89116 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vti1aO89116 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.64■□□□□ 0.25
Vti1aO89116 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.64■□□□□ 0.25
Vti1aO89116 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Gm17271-201ENSMUST00000165535 355 ntBASIC16.64■□□□□ 0.25
Vti1aO89116 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.64■□□□□ 0.25
Vti1aO89116 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.64■□□□□ 0.25
Vti1aO89116 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vti1aO89116 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.64■□□□□ 0.25
Vti1aO89116 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vti1aO89116 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1aO89116 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.63■□□□□ 0.25
Vti1aO89116 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Gm8344-201ENSMUST00000119813 856 ntBASIC16.63■□□□□ 0.25
Vti1aO89116 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Vti1aO89116 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.63■□□□□ 0.25
Vti1aO89116 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.63■□□□□ 0.25
Vti1aO89116 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.63■□□□□ 0.25
Vti1aO89116 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1aO89116 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vti1aO89116 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.62■□□□□ 0.25
Vti1aO89116 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Gm25911-201ENSMUST00000157621 56 ntBASIC16.62■□□□□ 0.25
Vti1aO89116 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vti1aO89116 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.62■□□□□ 0.25
Vti1aO89116 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vti1aO89116 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Vti1aO89116 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms