Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Syn1O88935 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Gm14928-201ENSMUST00000120198 477 ntBASIC15.86■□□□□ 0.13
Syn1O88935 Gm15693-201ENSMUST00000120470 637 ntBASIC15.86■□□□□ 0.13
Syn1O88935 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Syn1O88935 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Syn1O88935 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.86■□□□□ 0.13
Syn1O88935 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Syn1O88935 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.85■□□□□ 0.13
Syn1O88935 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.85■□□□□ 0.13
Syn1O88935 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.85■□□□□ 0.13
Syn1O88935 Gm6912-201ENSMUST00000117218 544 ntBASIC15.85■□□□□ 0.13
Syn1O88935 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.85■□□□□ 0.13
Syn1O88935 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.85■□□□□ 0.13
Syn1O88935 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.85■□□□□ 0.13
Syn1O88935 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.85■□□□□ 0.13
Syn1O88935 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Syn1O88935 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.85■□□□□ 0.13
Syn1O88935 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Syn1O88935 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.84■□□□□ 0.13
Syn1O88935 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.84■□□□□ 0.13
Syn1O88935 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.84■□□□□ 0.13
Syn1O88935 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Syn1O88935 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Syn1O88935 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.84■□□□□ 0.13
Syn1O88935 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.84■□□□□ 0.13
Syn1O88935 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.84■□□□□ 0.13
Syn1O88935 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Syn1O88935 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syn1O88935 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syn1O88935 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Syn1O88935 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Syn1O88935 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.83■□□□□ 0.13
Syn1O88935 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Syn1O88935 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Syn1O88935 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Syn1O88935 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Syn1O88935 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Syn1O88935 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Syn1O88935 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.82■□□□□ 0.12
Syn1O88935 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.82■□□□□ 0.12
Syn1O88935 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.82■□□□□ 0.12
Syn1O88935 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syn1O88935 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms