Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CcnkO88874 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CcnkO88874 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Gm10013-201ENSMUST00000106074 672 ntBASIC13.8□□□□□ -0.2
CcnkO88874 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CcnkO88874 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.8□□□□□ -0.2
CcnkO88874 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.8□□□□□ -0.2
CcnkO88874 Gm37722-201ENSMUST00000193757 208 ntBASIC13.8□□□□□ -0.2
CcnkO88874 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.8□□□□□ -0.2
CcnkO88874 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.8□□□□□ -0.2
CcnkO88874 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CcnkO88874 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CcnkO88874 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CcnkO88874 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.79□□□□□ -0.2
CcnkO88874 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.79□□□□□ -0.2
CcnkO88874 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CcnkO88874 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.79□□□□□ -0.2
CcnkO88874 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.79□□□□□ -0.2
CcnkO88874 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CcnkO88874 Gm10231-201ENSMUST00000181584 441 ntBASIC13.79□□□□□ -0.2
CcnkO88874 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Gm36967-201ENSMUST00000193814 266 ntBASIC13.79□□□□□ -0.2
CcnkO88874 Gm10175-202ENSMUST00000208752 441 ntBASIC13.79□□□□□ -0.2
CcnkO88874 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.79□□□□□ -0.2
CcnkO88874 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CcnkO88874 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CcnkO88874 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CcnkO88874 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.78□□□□□ -0.2
CcnkO88874 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.78□□□□□ -0.2
CcnkO88874 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.78□□□□□ -0.2
CcnkO88874 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.78□□□□□ -0.2
CcnkO88874 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.78□□□□□ -0.2
CcnkO88874 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.78□□□□□ -0.2
CcnkO88874 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CcnkO88874 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms