Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.78■□□□□ 0.44
Sema3fO88632 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.78■□□□□ 0.44
Sema3fO88632 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.78■□□□□ 0.44
Sema3fO88632 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sema3fO88632 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.78■□□□□ 0.44
Sema3fO88632 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.78■□□□□ 0.44
Sema3fO88632 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.78■□□□□ 0.44
Sema3fO88632 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.78■□□□□ 0.44
Sema3fO88632 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.77■□□□□ 0.44
Sema3fO88632 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.77■□□□□ 0.44
Sema3fO88632 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Sema3fO88632 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.77■□□□□ 0.44
Sema3fO88632 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sema3fO88632 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Gm20553-201ENSMUST00000204205 844 ntBASIC17.77■□□□□ 0.44
Sema3fO88632 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.77■□□□□ 0.44
Sema3fO88632 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sema3fO88632 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sema3fO88632 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sema3fO88632 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sema3fO88632 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.77■□□□□ 0.43
Sema3fO88632 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sema3fO88632 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sema3fO88632 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sema3fO88632 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
Sema3fO88632 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sema3fO88632 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sema3fO88632 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sema3fO88632 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Sema3fO88632 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.76■□□□□ 0.43
Sema3fO88632 Gm15427-201ENSMUST00000117288 531 ntBASIC17.76■□□□□ 0.43
Sema3fO88632 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.76■□□□□ 0.43
Sema3fO88632 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.76■□□□□ 0.43
Sema3fO88632 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.76■□□□□ 0.43
Sema3fO88632 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sema3fO88632 Gm10499-201ENSMUST00000174094 934 ntBASIC17.76■□□□□ 0.43
Sema3fO88632 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.76■□□□□ 0.43
Sema3fO88632 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sema3fO88632 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sema3fO88632 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sema3fO88632 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.75■□□□□ 0.43
Sema3fO88632 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.75■□□□□ 0.43
Sema3fO88632 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Thap2-203ENSMUST00000218989 527 ntBASIC17.75■□□□□ 0.43
Sema3fO88632 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sema3fO88632 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sema3fO88632 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.74■□□□□ 0.43
Sema3fO88632 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms