Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cops4O88544 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cops4O88544 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.3□□□□□ -0.12
Cops4O88544 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.3□□□□□ -0.12
Cops4O88544 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.3□□□□□ -0.12
Cops4O88544 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.3□□□□□ -0.12
Cops4O88544 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
Cops4O88544 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cops4O88544 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.29□□□□□ -0.12
Cops4O88544 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.29□□□□□ -0.12
Cops4O88544 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.29□□□□□ -0.12
Cops4O88544 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cops4O88544 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.29□□□□□ -0.12
Cops4O88544 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.29□□□□□ -0.12
Cops4O88544 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Cops4O88544 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cops4O88544 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.29□□□□□ -0.12
Cops4O88544 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.29□□□□□ -0.12
Cops4O88544 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.29□□□□□ -0.12
Cops4O88544 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.29□□□□□ -0.12
Cops4O88544 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cops4O88544 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cops4O88544 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cops4O88544 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.28□□□□□ -0.12
Cops4O88544 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Gm15565-201ENSMUST00000118890 427 ntBASIC14.28□□□□□ -0.12
Cops4O88544 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.28□□□□□ -0.12
Cops4O88544 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cops4O88544 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cops4O88544 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cops4O88544 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cops4O88544 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops4O88544 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms