Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm7367-201ENSMUST00000057611 492 ntBASIC14.45□□□□□ -0.1
Tulp3O88413 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tulp3O88413 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tulp3O88413 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.45□□□□□ -0.1
Tulp3O88413 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tulp3O88413 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Tulp3O88413 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tulp3O88413 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.44□□□□□ -0.1
Tulp3O88413 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Tulp3O88413 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tulp3O88413 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tulp3O88413 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Tulp3O88413 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tulp3O88413 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.43□□□□□ -0.1
Tulp3O88413 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Gm9987-201ENSMUST00000069768 567 ntBASIC14.43□□□□□ -0.1
Tulp3O88413 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tulp3O88413 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tulp3O88413 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Tulp3O88413 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.42□□□□□ -0.1
Tulp3O88413 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tulp3O88413 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tulp3O88413 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tulp3O88413 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tulp3O88413 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms