Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ttc3O88196 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ttc3O88196 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Ttc3O88196 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.08■□□□□ 0.17
Ttc3O88196 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ttc3O88196 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ttc3O88196 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ttc3O88196 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.08■□□□□ 0.16
Ttc3O88196 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.08■□□□□ 0.16
Ttc3O88196 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.08■□□□□ 0.16
Ttc3O88196 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ttc3O88196 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.08■□□□□ 0.16
Ttc3O88196 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ttc3O88196 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ttc3O88196 Gm6973-201ENSMUST00000117080 721 ntBASIC16.07■□□□□ 0.16
Ttc3O88196 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ttc3O88196 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ttc3O88196 Mir449b-201ENSMUST00000104833 80 ntBASIC16.07■□□□□ 0.16
Ttc3O88196 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
Ttc3O88196 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Gm7063-201ENSMUST00000186840 981 ntBASIC16.07■□□□□ 0.16
Ttc3O88196 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ttc3O88196 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.07■□□□□ 0.16
Ttc3O88196 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ttc3O88196 Prob1-201ENSMUST00000097619 3021 ntBASIC16.07■□□□□ 0.16
Ttc3O88196 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.07■□□□□ 0.16
Ttc3O88196 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ttc3O88196 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.06■□□□□ 0.16
Ttc3O88196 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.06■□□□□ 0.16
Ttc3O88196 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.06■□□□□ 0.16
Ttc3O88196 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ttc3O88196 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.06■□□□□ 0.16
Ttc3O88196 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ttc3O88196 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.06■□□□□ 0.16
Ttc3O88196 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.06■□□□□ 0.16
Ttc3O88196 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
Ttc3O88196 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ttc3O88196 Gm25948-201ENSMUST00000175334 112 ntBASIC16.06■□□□□ 0.16
Ttc3O88196 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.06■□□□□ 0.16
Ttc3O88196 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ttc3O88196 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ttc3O88196 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.05■□□□□ 0.16
Ttc3O88196 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.05■□□□□ 0.16
Ttc3O88196 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ttc3O88196 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ttc3O88196 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.05■□□□□ 0.16
Ttc3O88196 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.05■□□□□ 0.16
Ttc3O88196 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms