Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vamp4O70480 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vamp4O70480 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.43■□□□□ 0.7
Vamp4O70480 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.43■□□□□ 0.7
Vamp4O70480 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vamp4O70480 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.43■□□□□ 0.7
Vamp4O70480 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.43■□□□□ 0.7
Vamp4O70480 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Vamp4O70480 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vamp4O70480 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Vamp4O70480 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vamp4O70480 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.42■□□□□ 0.7
Vamp4O70480 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Vamp4O70480 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vamp4O70480 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.41■□□□□ 0.7
Vamp4O70480 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.41■□□□□ 0.7
Vamp4O70480 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.41■□□□□ 0.7
Vamp4O70480 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Vamp4O70480 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Vamp4O70480 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.41■□□□□ 0.7
Vamp4O70480 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Vamp4O70480 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vamp4O70480 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.41■□□□□ 0.7
Vamp4O70480 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vamp4O70480 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vamp4O70480 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.4■□□□□ 0.7
Vamp4O70480 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.4■□□□□ 0.7
Vamp4O70480 Gm17968-201ENSMUST00000194902 784 ntBASIC19.4■□□□□ 0.7
Vamp4O70480 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vamp4O70480 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.4■□□□□ 0.7
Vamp4O70480 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.4■□□□□ 0.7
Vamp4O70480 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp4O70480 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vamp4O70480 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vamp4O70480 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vamp4O70480 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vamp4O70480 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms