Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Gm13884-201ENSMUST00000118103 829 ntBASIC14.64□□□□□ -0.07
Rdh5O55240 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Rdh5O55240 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.64□□□□□ -0.07
Rdh5O55240 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh5O55240 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rdh5O55240 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.63□□□□□ -0.07
Rdh5O55240 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Rdh5O55240 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.63□□□□□ -0.07
Rdh5O55240 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Rdh5O55240 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.63□□□□□ -0.07
Rdh5O55240 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.63□□□□□ -0.07
Rdh5O55240 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.63□□□□□ -0.07
Rdh5O55240 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rdh5O55240 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rdh5O55240 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.62□□□□□ -0.07
Rdh5O55240 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rdh5O55240 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.62□□□□□ -0.07
Rdh5O55240 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rdh5O55240 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rdh5O55240 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rdh5O55240 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rdh5O55240 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.61□□□□□ -0.07
Rdh5O55240 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.61□□□□□ -0.07
Rdh5O55240 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rdh5O55240 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.61□□□□□ -0.07
Rdh5O55240 Gm18195-201ENSMUST00000207604 706 ntBASIC14.61□□□□□ -0.07
Rdh5O55240 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rdh5O55240 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms