Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pja1O55176 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.33■□□□□ 0.2
Pja1O55176 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.33■□□□□ 0.2
Pja1O55176 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pja1O55176 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pja1O55176 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.32■□□□□ 0.2
Pja1O55176 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Pja1O55176 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.32■□□□□ 0.2
Pja1O55176 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.32■□□□□ 0.2
Pja1O55176 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.32■□□□□ 0.2
Pja1O55176 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.32■□□□□ 0.2
Pja1O55176 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.32■□□□□ 0.2
Pja1O55176 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.32■□□□□ 0.2
Pja1O55176 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.32■□□□□ 0.2
Pja1O55176 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.32■□□□□ 0.2
Pja1O55176 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
Pja1O55176 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pja1O55176 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pja1O55176 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pja1O55176 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Mir3081-201ENSMUST00000175305 84 ntBASIC16.31■□□□□ 0.2
Pja1O55176 Gm9172-201ENSMUST00000212092 954 ntBASIC16.31■□□□□ 0.2
Pja1O55176 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pja1O55176 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.31■□□□□ 0.2
Pja1O55176 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pja1O55176 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pja1O55176 Efs-202ENSMUST00000227037 2540 ntBASIC16.3■□□□□ 0.2
Pja1O55176 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pja1O55176 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.3■□□□□ 0.2
Pja1O55176 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pja1O55176 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Pja1O55176 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms