Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.35□□□□□ -0.11
BckdkO55028 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BckdkO55028 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BckdkO55028 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BckdkO55028 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BckdkO55028 Sybu-209ENSMUST00000228639 4113 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
BckdkO55028 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
BckdkO55028 Gm12497-201ENSMUST00000138778 237 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Gm10060-201ENSMUST00000212002 111 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.34□□□□□ -0.11
BckdkO55028 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BckdkO55028 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.34□□□□□ -0.11
BckdkO55028 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BckdkO55028 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BckdkO55028 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.33□□□□□ -0.11
BckdkO55028 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BckdkO55028 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
BckdkO55028 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.33□□□□□ -0.12
BckdkO55028 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BckdkO55028 Gm4535-201ENSMUST00000182274 558 ntBASIC14.33□□□□□ -0.12
BckdkO55028 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.33□□□□□ -0.12
BckdkO55028 Gm9172-201ENSMUST00000212092 954 ntBASIC14.33□□□□□ -0.12
BckdkO55028 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Gm10355-201ENSMUST00000097146 517 ntBASIC14.33□□□□□ -0.12
BckdkO55028 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BckdkO55028 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BckdkO55028 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 Gm18206-201ENSMUST00000207027 926 ntBASIC14.32□□□□□ -0.12
BckdkO55028 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BckdkO55028 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.32□□□□□ -0.12
BckdkO55028 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.32□□□□□ -0.12
BckdkO55028 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.32□□□□□ -0.12
BckdkO55028 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms