Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.99■□□□□ 0.31
Prom1O54990 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Prom1O54990 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Mir449b-201ENSMUST00000104833 80 ntBASIC16.99■□□□□ 0.31
Prom1O54990 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Prom1O54990 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.99■□□□□ 0.31
Prom1O54990 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.99■□□□□ 0.31
Prom1O54990 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.99■□□□□ 0.31
Prom1O54990 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.99■□□□□ 0.31
Prom1O54990 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.99■□□□□ 0.31
Prom1O54990 Gm10154-201ENSMUST00000084445 354 ntBASIC16.99■□□□□ 0.31
Prom1O54990 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prom1O54990 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prom1O54990 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.98■□□□□ 0.31
Prom1O54990 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Gm22175-201ENSMUST00000175007 78 ntBASIC16.98■□□□□ 0.31
Prom1O54990 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.98■□□□□ 0.31
Prom1O54990 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.98■□□□□ 0.31
Prom1O54990 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prom1O54990 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.98■□□□□ 0.31
Prom1O54990 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Prom1O54990 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.98■□□□□ 0.31
Prom1O54990 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.98■□□□□ 0.31
Prom1O54990 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prom1O54990 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Prom1O54990 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Prom1O54990 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Prom1O54990 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.97■□□□□ 0.31
Prom1O54990 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.97■□□□□ 0.31
Prom1O54990 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.97■□□□□ 0.31
Prom1O54990 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.97■□□□□ 0.31
Prom1O54990 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Prom1O54990 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prom1O54990 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.96■□□□□ 0.31
Prom1O54990 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.96■□□□□ 0.31
Prom1O54990 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.96■□□□□ 0.31
Prom1O54990 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Prom1O54990 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.96■□□□□ 0.31
Prom1O54990 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Prom1O54990 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prom1O54990 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prom1O54990 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.96■□□□□ 0.3
Prom1O54990 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Prom1O54990 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prom1O54990 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.95■□□□□ 0.3
Prom1O54990 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prom1O54990 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prom1O54990 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms