Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Stx1aO35526 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Stx1aO35526 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.39■□□□□ 0.37
Stx1aO35526 Gm25406-201ENSMUST00000157599 105 ntBASIC17.39■□□□□ 0.37
Stx1aO35526 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stx1aO35526 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Stx1aO35526 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.38■□□□□ 0.37
Stx1aO35526 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.38■□□□□ 0.37
Stx1aO35526 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Stx1aO35526 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.38■□□□□ 0.37
Stx1aO35526 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Stx1aO35526 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Stx1aO35526 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stx1aO35526 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Gm18032-201ENSMUST00000222541 538 ntBASIC17.37■□□□□ 0.37
Stx1aO35526 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Stx1aO35526 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Stx1aO35526 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Stx1aO35526 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stx1aO35526 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Stx1aO35526 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Stx1aO35526 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Stx1aO35526 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Stx1aO35526 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.36■□□□□ 0.37
Stx1aO35526 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.36■□□□□ 0.37
Stx1aO35526 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.36■□□□□ 0.37
Stx1aO35526 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Stx1aO35526 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Stx1aO35526 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stx1aO35526 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Stx1aO35526 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stx1aO35526 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms