Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.74□□□□□ -0.05
Clk3O35492 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.74□□□□□ -0.05
Clk3O35492 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.74□□□□□ -0.05
Clk3O35492 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.74□□□□□ -0.05
Clk3O35492 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Clk3O35492 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.73□□□□□ -0.05
Clk3O35492 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm13312-201ENSMUST00000119631 718 ntBASIC14.73□□□□□ -0.05
Clk3O35492 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.73□□□□□ -0.05
Clk3O35492 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.73□□□□□ -0.05
Clk3O35492 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clk3O35492 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.73□□□□□ -0.05
Clk3O35492 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.73□□□□□ -0.05
Clk3O35492 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.73□□□□□ -0.05
Clk3O35492 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clk3O35492 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Clk3O35492 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clk3O35492 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.73□□□□□ -0.05
Clk3O35492 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.72□□□□□ -0.05
Clk3O35492 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.72□□□□□ -0.05
Clk3O35492 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.72□□□□□ -0.05
Clk3O35492 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.72□□□□□ -0.05
Clk3O35492 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.72□□□□□ -0.05
Clk3O35492 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.72□□□□□ -0.05
Clk3O35492 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Clk3O35492 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.72□□□□□ -0.05
Clk3O35492 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Clk3O35492 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clk3O35492 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.71□□□□□ -0.05
Clk3O35492 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Clk3O35492 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.71□□□□□ -0.05
Clk3O35492 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.71□□□□□ -0.05
Clk3O35492 Mir3081-201ENSMUST00000175305 84 ntBASIC14.71□□□□□ -0.05
Clk3O35492 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.71□□□□□ -0.05
Clk3O35492 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Clk3O35492 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clk3O35492 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clk3O35492 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clk3O35492 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clk3O35492 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clk3O35492 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.71□□□□□ -0.06
Clk3O35492 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clk3O35492 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clk3O35492 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clk3O35492 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clk3O35492 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms