Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm3760-201ENSMUST00000167475 804 ntBASIC16.75■□□□□ 0.27
Clcn6O35454 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm42734-201ENSMUST00000201656 878 ntBASIC16.75■□□□□ 0.27
Clcn6O35454 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 AC147101.1-201ENSMUST00000217964 312 ntBASIC16.75■□□□□ 0.27
Clcn6O35454 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.75■□□□□ 0.27
Clcn6O35454 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.75■□□□□ 0.27
Clcn6O35454 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Clcn6O35454 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Gm27845-201ENSMUST00000184479 114 ntBASIC16.74■□□□□ 0.27
Clcn6O35454 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.74■□□□□ 0.27
Clcn6O35454 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC16.74■□□□□ 0.27
Clcn6O35454 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn6O35454 AC154643.1-201ENSMUST00000225643 625 ntBASIC16.74■□□□□ 0.27
Clcn6O35454 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn6O35454 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.73■□□□□ 0.27
Clcn6O35454 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.73■□□□□ 0.27
Clcn6O35454 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Clcn6O35454 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Clcn6O35454 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC16.73■□□□□ 0.27
Clcn6O35454 Gm36997-201ENSMUST00000195090 707 ntBASIC16.73■□□□□ 0.27
Clcn6O35454 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC16.73■□□□□ 0.27
Clcn6O35454 Gm2651-201ENSMUST00000203560 838 ntBASIC16.73■□□□□ 0.27
Clcn6O35454 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clcn6O35454 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clcn6O35454 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clcn6O35454 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Clcn6O35454 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clcn6O35454 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn6O35454 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Clcn6O35454 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.72■□□□□ 0.27
Clcn6O35454 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Clcn6O35454 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Clcn6O35454 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcn6O35454 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Clcn6O35454 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcn6O35454 Gm2274-201ENSMUST00000184539 609 ntBASIC16.72■□□□□ 0.27
Clcn6O35454 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC16.72■□□□□ 0.27
Clcn6O35454 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.72■□□□□ 0.27
Clcn6O35454 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Clcn6O35454 Gm19189-201ENSMUST00000221689 754 ntBASIC16.72■□□□□ 0.27
Clcn6O35454 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
Clcn6O35454 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn6O35454 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms