Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11aO35305 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11aO35305 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11aO35305 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Gm7222-201ENSMUST00000117512 906 ntBASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11aO35305 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11aO35305 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Gm12350-201ENSMUST00000121208 462 ntBASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 AV026068-213ENSMUST00000223675 1171 ntBASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Gm15590-201ENSMUST00000078419 552 ntBASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11aO35305 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11aO35305 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Tnfrsf11aO35305 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11aO35305 Gm13036-201ENSMUST00000117799 748 ntBASIC16.58■□□□□ 0.24
Tnfrsf11aO35305 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms