Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col15a1O35206 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col15a1O35206 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.66■□□□□ 0.74
Col15a1O35206 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.66■□□□□ 0.74
Col15a1O35206 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
Col15a1O35206 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col15a1O35206 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.66■□□□□ 0.74
Col15a1O35206 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.66■□□□□ 0.74
Col15a1O35206 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Col15a1O35206 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Col15a1O35206 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.66■□□□□ 0.74
Col15a1O35206 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Col15a1O35206 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.66■□□□□ 0.74
Col15a1O35206 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.66■□□□□ 0.74
Col15a1O35206 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.66■□□□□ 0.74
Col15a1O35206 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.66■□□□□ 0.74
Col15a1O35206 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col15a1O35206 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col15a1O35206 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col15a1O35206 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Col15a1O35206 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col15a1O35206 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Col15a1O35206 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.65■□□□□ 0.74
Col15a1O35206 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col15a1O35206 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col15a1O35206 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.65■□□□□ 0.74
Col15a1O35206 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.65■□□□□ 0.74
Col15a1O35206 Mir7684-201ENSMUST00000183858 60 ntBASIC19.65■□□□□ 0.74
Col15a1O35206 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col15a1O35206 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Col15a1O35206 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col15a1O35206 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col15a1O35206 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.65■□□□□ 0.74
Col15a1O35206 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col15a1O35206 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Col15a1O35206 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col15a1O35206 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col15a1O35206 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.64■□□□□ 0.73
Col15a1O35206 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.64■□□□□ 0.73
Col15a1O35206 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.64■□□□□ 0.73
Col15a1O35206 Gm18049-201ENSMUST00000208909 581 ntBASIC19.64■□□□□ 0.73
Col15a1O35206 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col15a1O35206 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col15a1O35206 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col15a1O35206 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col15a1O35206 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.63■□□□□ 0.73
Col15a1O35206 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col15a1O35206 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col15a1O35206 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col15a1O35206 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Col15a1O35206 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.63■□□□□ 0.73
Col15a1O35206 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col15a1O35206 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.62■□□□□ 0.73
Col15a1O35206 Gm25144-201ENSMUST00000179561 110 ntBASIC19.62■□□□□ 0.73
Col15a1O35206 Gm25352-201ENSMUST00000179815 110 ntBASIC19.62■□□□□ 0.73
Col15a1O35206 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Gm9063-201ENSMUST00000223299 582 ntBASIC19.62■□□□□ 0.73
Col15a1O35206 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.62■□□□□ 0.73
Col15a1O35206 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col15a1O35206 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms