Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cx3cl1O35188 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cx3cl1O35188 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.53□□□□□ -0.08
Cx3cl1O35188 Gm7230-201ENSMUST00000173026 815 ntBASIC14.53□□□□□ -0.08
Cx3cl1O35188 Gm10060-201ENSMUST00000212002 111 ntBASIC14.53□□□□□ -0.08
Cx3cl1O35188 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 App-207ENSMUST00000227737 2827 ntBASIC14.53□□□□□ -0.08
Cx3cl1O35188 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cx3cl1O35188 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Cx3cl1O35188 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cx3cl1O35188 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.52□□□□□ -0.09
Cx3cl1O35188 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cx3cl1O35188 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.51□□□□□ -0.09
Cx3cl1O35188 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.51□□□□□ -0.09
Cx3cl1O35188 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gm27646-201ENSMUST00000183989 110 ntBASIC14.51□□□□□ -0.09
Cx3cl1O35188 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.51□□□□□ -0.09
Cx3cl1O35188 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cx3cl1O35188 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms