Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.41■□□□□ 0.54
Hdac1O09106 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac1O09106 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac1O09106 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Hdac1O09106 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac1O09106 Gm10231-201ENSMUST00000181584 441 ntBASIC18.4■□□□□ 0.54
Hdac1O09106 Mir6982-201ENSMUST00000184354 68 ntBASIC18.4■□□□□ 0.54
Hdac1O09106 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.4■□□□□ 0.54
Hdac1O09106 Gm10175-202ENSMUST00000208752 441 ntBASIC18.4■□□□□ 0.54
Hdac1O09106 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac1O09106 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hdac1O09106 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hdac1O09106 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hdac1O09106 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.39■□□□□ 0.53
Hdac1O09106 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Mir3081-201ENSMUST00000175305 84 ntBASIC18.39■□□□□ 0.53
Hdac1O09106 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.39■□□□□ 0.53
Hdac1O09106 Gm19164-201ENSMUST00000210667 640 ntBASIC18.39■□□□□ 0.53
Hdac1O09106 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac1O09106 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac1O09106 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.38■□□□□ 0.53
Hdac1O09106 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Hdac1O09106 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Hdac1O09106 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.38■□□□□ 0.53
Hdac1O09106 Gm12134-201ENSMUST00000122109 520 ntBASIC18.38■□□□□ 0.53
Hdac1O09106 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.38■□□□□ 0.53
Hdac1O09106 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hdac1O09106 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac1O09106 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Hdac1O09106 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac1O09106 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms