Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Mir8098-201ENSMUST00000184011 137 ntBASIC14.37□□□□□ -0.11
Hps1O08983 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hps1O08983 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hps1O08983 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hps1O08983 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps1O08983 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hps1O08983 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Hps1O08983 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hps1O08983 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.36□□□□□ -0.11
Hps1O08983 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hps1O08983 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hps1O08983 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps1O08983 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.35□□□□□ -0.11
Hps1O08983 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hps1O08983 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.35□□□□□ -0.11
Hps1O08983 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hps1O08983 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.35□□□□□ -0.11
Hps1O08983 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Hps1O08983 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hps1O08983 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.35□□□□□ -0.11
Hps1O08983 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hps1O08983 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Hps1O08983 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hps1O08983 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.35□□□□□ -0.11
Hps1O08983 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hps1O08983 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hps1O08983 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hps1O08983 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms