Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.23□□□□□ -0.29
Casp6O08738 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casp6O08738 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.22□□□□□ -0.29
Casp6O08738 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.22□□□□□ -0.29
Casp6O08738 Gm45612-201ENSMUST00000211320 160 ntBASIC13.22□□□□□ -0.29
Casp6O08738 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Gm18246-201ENSMUST00000221023 728 ntBASIC13.22□□□□□ -0.29
Casp6O08738 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.22□□□□□ -0.29
Casp6O08738 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.22□□□□□ -0.29
Casp6O08738 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.22□□□□□ -0.29
Casp6O08738 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Casp6O08738 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Casp6O08738 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Casp6O08738 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.22□□□□□ -0.29
Casp6O08738 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casp6O08738 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Casp6O08738 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Haglr-201ENSMUST00000100000 2085 ntBASIC13.21□□□□□ -0.29
Casp6O08738 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.21□□□□□ -0.29
Casp6O08738 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Casp6O08738 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.21□□□□□ -0.29
Casp6O08738 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.21□□□□□ -0.29
Casp6O08738 Gm17968-201ENSMUST00000194902 784 ntBASIC13.21□□□□□ -0.29
Casp6O08738 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casp6O08738 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Casp6O08738 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casp6O08738 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Casp6O08738 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.2□□□□□ -0.3
Casp6O08738 AA543401-201ENSMUST00000164248 1269 ntBASIC13.2□□□□□ -0.3
Casp6O08738 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.2□□□□□ -0.3
Casp6O08738 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.2□□□□□ -0.3
Casp6O08738 Gm44335-201ENSMUST00000196879 141 ntBASIC13.2□□□□□ -0.3
Casp6O08738 Gm44297-201ENSMUST00000198304 141 ntBASIC13.2□□□□□ -0.3
Casp6O08738 Gm44346-201ENSMUST00000198851 141 ntBASIC13.2□□□□□ -0.3
Casp6O08738 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Casp6O08738 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casp6O08738 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms